The AWS Batch team recently added container insights and advanced logging features to the Batch console, which is making a LOT of people very happy. We decided to catch up with the dev team in Seattle who worked on this, and one of my …
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Ampersand is a data-driven TV advertising technology company that provides aggregated TV audience impression insights and planning on 42 million households, in every media market, across more than 165 networks and apps and in all dayparts …
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This post covers the different ways you can encode a dependency between basic and array jobs in AWS Batch. We also cover why you may want to encode dependencies outside of Batch altogether using a workflow system like AWS Step Functions or …
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In this post, I cover some of the recent updates to AWS Batch, including improvements to job placement, addition of AWS PrivateLink support, and the new capabilities to update your AWS Batch compute environments. Read the Post on the AWS …
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Matt Rasmussen, VP of Software Engineering at insitro, expands on his first post on redun, insitro’s data science tool for bioinformatics, to describe how redun makes use of advanced AWS features. Specifically, Matt describes how AWS …
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Matt Rasmussen, VP of Software Engineering at insitro describes their recently released, open-source data science framework, redun, which allows data scientists to define complex scientific workflows that scale from their laptop to …
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The AWS Genomics CLI (or AGC) seriously removes all the grunt work involved in setting up bioinformatics pipelines to run in the cloud. We know that Snakemake, Cromwell, NextFlow and miniWDL all work happily in the cloud on AWS Batch, but …
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It’s an understatement that AWS has a lot of services (more than 200 at the time of this post!). We’re usually the first to point out that there’s more than one way to solve a problem. HPC is no different in this regard, because we offer a …
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