Today, we discuss AWS batch on Amazon EKS, and the initial motivation and design choices the team made when we developed the service, and some of the challenges to overcome. Read the Post on the AWS Blog Channel
Read More
Today we are excited to announce that all 9000+ applications provided by the BioContainers community are available within ECR Public Gallery! You don’t need an AWS account to access these images, but having one allows many more pulls to the …
Read More
In this post, we describe how to orchestrate protein folding jobs on AWS Batch. We also compare the performance of OpenFold and AlphaFold on a set of public targets. Finally, we will discuss how to optimize your protein folding costs. Read …
Read More
AWS service teams continuously improve the underlying infrastructure and operations of managed services, and AWS Batch is no exception. The AWS Batch team recently moved most of their job scheduler fleet to a serverless infrastructure model …
Read More
In this blog post, we demonstrate how to leverage the AWS Genomics Command line and Amazon SageMaker to analyze large-scale exome sequences and derive meaningful insights. We use the bioinformatics workflow manager Nextflow, it’s open …
Read More
This blog post explains how to run parallel rendering workloads and produce an animation in a cost and time effective way using AWS Batch and AWS Step Functions. AWS Batch manages the rendering jobs on Amazon Elastic Compute Cloud (Amazon …
Read More
In this blog post, we’ll show how you can run NVIDIA Parabricks on AWS Batch leveraging AWS CloudFormation templates. Parabricks is a GPU-accelerated tool for secondary genomic analysis. It reduces the runtime of variant calling on a 30x …
Read More
In this blog post, we help you understand the AWS Batch job termination process and how you may take actions to gracefully terminate a job by capturing SIGTERM signal inside the application. It provides you with an efficient way to exit …
Read More