In this post, we describe how to orchestrate protein folding jobs on AWS Batch. We also compare the performance of OpenFold and AlphaFold on a set of public targets. Finally, we will discuss how to optimize your protein folding costs. Read …
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Amazon EC2 is the engine that powers HPC in the cloud. There’s quite a lot that’s new if you’ve never seen it before. in this Level 1 module in the Tech Shorts Foundations Series, we aim to demystify EC2 for the HPC …
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We get it: AWS has too much stuff going on for any reasonably busy human to catch up with. So we’re going back to the foundations of AWS to help the HPC community come up to speed on the stuff that matters to them most. Today …
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We get it: AWS has too much stuff going on for any reasonably busy human to catch up with. So we’re going back to the foundations of AWS to help the HPC community come up to speed on the stuff that matters to them most. Today …
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In this blog, we showcase the first version of Open Omics and benchmark three applications that are used in processing NGS data – sequence alignment tools BWA-MEM, minimap2, and single cell ATAC-Seq on Xeon-based Amazon Elastic Compute …
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Spack has already been removing the ugly work from building HPC codes, but with the announcement of the Spack Binary Cache at ISC'22, build and deploy times for these complicated applications will drop by 95% or more in most cases. Greg …
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ParallelCluster can now mount lots and lots of file systems that you’ve previously created in your AWS account, in addition to the scratch filesystem you can ask it to create for you when you launch your cluster. And as of today, …
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If you’ve ever had to iteratively guess how much memory is left in a bunch of compute nodes in order to get your memory-hungry jobs running, then this feature will save your sanity. It’s a new integration between ParallelCluster …
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